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ASM2539993v1

Organism name:
Amblyopsis rosae (Ozark cavefish)
Isolate:
L1
BioSample:
SAMN20209507
BioProject:
PRJNA737782
Submitter:
Iridian Genomes
Date:
2022/09/25
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_025399935.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAODTR01
Assembly method:
SPAdes v. 2021
Expected final version:
yes
Genome coverage:
60.0x
Sequencing technology:
Illumina

IDs: 13952021 [UID] 36238648 [GenBank]

See Genome Information for Amblyopsis rosae

History (Show revision history)

Comment

Global statistics

Total sequence length551,693,502
Total ungapped length546,140,307
Gaps between scaffolds0
Number of scaffolds97,286
Scaffold N5011,889
Scaffold L509,528
Number of contigs110,613
Contig N509,726
Contig L5015,617
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)97,286

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced551,693,50297,286546,140,30711,88913,3270