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UDNC_Vigmung

Organism name:
Vigna mungo (black gram)
Infraspecific name:
Cultivar: IPU-94-1
BioSample:
SAMN16409654
BioProject:
PRJNA668459
Submitter:
University Of Delhi
Date:
2022/06/29
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_023940565.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAMTDO01
Assembly method:
FALCON v. 0.3
Expected final version:
yes
Reference guided assembly:
GCA_013427195.1
Genome coverage:
57.3x
Sequencing technology:
PacBio RSII; Illumina HiSeq

IDs: 13126951 [UID] 34315788 [GenBank]

See Genome Information for Vigna mungo

There are 5 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length454,426,400
Total ungapped length454,175,100
Gaps between scaffolds0
Number of scaffolds519
Scaffold N5042,881,300
Scaffold L505
Number of contigs3,032
Contig N50350,938
Contig L50384
Total number of chromosomes and plasmids11
Number of component sequences (WGS or clone)519

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_023941645.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM043886.1n/an/a0
Chromosome 2CM043887.1n/an/a0
Chromosome 3CM043888.1n/an/a0
Chromosome 4CM043889.1n/an/a0
Chromosome 5CM043890.1n/an/a0
Chromosome 6CM043891.1n/an/a0
Chromosome 7CM043892.1n/an/a0
Chromosome 8CM043893.1n/an/a0
Chromosome 9CM043894.1n/an/a0
Chromosome 10CM043895.1n/an/a0
Chromosome 11CM043896.1n/an/a0
unplacedn/an/an/a508

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All454,426,400519454,175,10042,881,3002,5130
Chromosome 162,770,658162,737,25862,770,6583340
Chromosome 249,608,432149,589,13249,608,4321930
Chromosome 346,489,003146,460,60346,489,0032840
Chromosome 443,483,260143,461,96043,483,2602130
Chromosome 542,881,300142,862,00042,881,3001930
Chromosome 639,114,481139,097,58139,114,4811690
Chromosome 735,671,532135,654,13235,671,5321740
Chromosome 835,423,946135,404,14635,423,9461980
Chromosome 934,594,688134,575,08834,594,6881960
Chromosome 1029,911,281129,894,28129,911,2811700
Chromosome 1124,451,538124,440,03824,451,5381150
unplaced10,026,2815089,998,88138,3652740