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ASM2130976v1

Organism name:
Aggregatibacter actinomycetemcomitans (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: 362M
BioSample:
SAMN14969773
BioProject:
PRJNA633763
Submitter:
Aarhus University Hospital, Denmark
Date:
2021/12/28
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_021309765.1 (latest)
RefSeq assembly accession:
GCF_021309765.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JABJYY01
Assembly method:
Unicycler: v. 0.4.7
Expected final version:
yes
Genome coverage:
97x
Sequencing technology:
Illumina NextSeq

IDs: 11678891 [UID] 30742358 [GenBank] 30758298 [RefSeq]

See Genome Information for Aggregatibacter actinomycetemcomitans

There are 187 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,081,488
Total ungapped length2,081,488
Number of contigs21
Contig N50248,889
Contig L503
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)21

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,081,488212,081,488248,88900

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Aggregatibacter actinomycetemcomitansAggregatibacter actinomycetemcomitans

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000372365.1Aggregatibacter actinomycetemcomitans DSM 8324type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000372365.1Aggregatibacter actinomycetemcomitanstype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.1194.1293.92
Best-match type99.1194.1293.92

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna