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ASM1997417v1

Organism name:
Klebsiella pneumoniae subsp. pneumoniae (enterobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: RTE-E3
BioSample:
SAMD00399200
BioProject:
PRJDB12144
Submitter:
Tokyo University of Marine Science and Technology
Date:
2021/08/27
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
Excluded from RefSeq:
  • missing ribosomal protein genes
GenBank assembly accession:
GCA_019974175.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
Assembly method:
SPAdes v. 3.11.1
Genome coverage:
120x
Sequencing technology:
Illumina MiSeq

IDs: 10898901 [UID] 28842518 [GenBank]

See Genome Information for Klebsiella pneumoniae

There are 65327 assemblies for this organism

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History (Show revision history)

Comment

Annotated by DFAST https://dfast.ddbj.nig.ac.jp/

Global statistics

Total sequence length5,361,091
Total ungapped length5,361,091
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_019974185.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome AP025034.1n/an/a

Assembly statistics

MoleculeTotal
Length
Chromosome 5,361,091

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Klebsiella pneumoniae subsp. pneumoniaeKlebsiella pneumoniae

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000788015.1Klebsiella pneumoniae subsp. pneumoniaetype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000788015.1Klebsiella pneumoniaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.1991.9986.13
Best-match type99.1991.9986.13

ANI result

Taxonomy check statusBest match statusComment
OKsubspecies-matchna