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ASM1965621v1

Organism name:
Apilactobacillus zhangqiuensis (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: F502-1
BioSample:
SAMD00326014
BioProject:
PRJDB7793
Submitter:
Northeast Agricultural University
Date:
2021/06/16
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_019656215.1 (latest)
RefSeq assembly accession:
GCF_019656215.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
BPLK01
Assembly method:
A5-MiSeq v. 20160825; SPAdes v. 3.12.0
Genome coverage:
684x
Sequencing technology:
Illumina NovaSeq

IDs: 10726451 [UID] 28414438 [GenBank] 28481898 [RefSeq]

See Genome Information for Apilactobacillus zhangqiuensis

History (Show revision history)

Comment

Global statistics

Total sequence length1,445,942
Total ungapped length1,445,942
Number of contigs8
Contig N50268,821
Contig L503
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)8

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,445,94281,445,942268,82100

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Apilactobacillus zhangqiuensisApilactobacillus zhangqiuensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_019061205.1Apilactobacillus waqariitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type91.7993.2890.47

ANI result

Taxonomy check statusBest match statusComment
OKbelow-threshold-mismatchAssembly is the type-strain, mismatch is within genus and expected