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ASM1904712v1

Organism name:
Aeromonas sp. FDAARGOS 1411 (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: FDAARGOS 1411
BioSample:
SAMN16357553
BioProject:
PRJNA231221
Submitter:
US Food and Drug Administration
Date:
2021/06/28
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_019047125.1 (latest)
RefSeq assembly accession:
GCF_019047125.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Assembly method:
SMRT v. 9.0.0, HGAP v. 4.0
Genome coverage:
1403.98x
Sequencing technology:
Pacbio; Illumina

IDs: 10391531 [UID] 27593848 [GenBank] 27603218 [RefSeq]

See Genome Information for Aeromonas sp. FDAARGOS 1411

History (Show revision history)

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::07/21/2023 04:04:24
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.5
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::4,160
CDSs (total)::4,001
Genes (coding)::3,985
CDSs (with protein)::3,985
Genes (RNA)::159
rRNAs::11, 10, 10 (5S, 16S, 23S)
complete rRNAs::11, 10, 10 (5S, 16S, 23S)
tRNAs::123
ncRNAs::5
Pseudo Genes (total)::16
CDSs (without protein)::16
Pseudo Genes (ambiguous residues)::0 of 16
Pseudo Genes (frameshifted)::5 of 16
Pseudo Genes (incomplete)::10 of 16
Pseudo Genes (internal stop)::4 of 16
Pseudo Genes (multiple problems)::2 of 16
##Genome-Annotation-Data-END##

Global statistics

Total sequence length4,539,453
Total ungapped length4,539,453
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_019047135.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP077214.1=NZ_CP077214.1

Assembly statistics

MoleculeTotal
Length
Chromosome 4,539,453

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Aeromonas sp. FDAARGOS 1411Aeromonas sp. FDAARGOS 1411

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_018359905.1Aeromonas veroniitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type96.3388.8789.48

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna