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HG02055.pri.mat.f1_v2

Organism name:
Homo sapiens (human)
Isolate:
HG02055
Sex:
female
BioSample:
SAMN12162856
BioProject:
PRJNA727422
Submitter:
UCSC Genomics Institute
Date:
2021/05/26
Assembly type:
haploid (maternal haplotype of diploid)
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_018506125.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAHEPJ01
Assembly method:
Hifiasm v. 0.14
Expected final version:
no
Genome coverage:
47x
Sequencing technology:
PacBio Sequel
Linked assembly:
GCA_018505855.1 (paternal haplotype of diploid)

IDs: 10123631 [UID] 26917888 [GenBank]

See Genome Information for Homo sapiens

There are 1094 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length3,019,590,183
Total ungapped length3,019,590,149
Gaps between scaffolds0
Number of scaffolds306
Scaffold N5035,182,712
Scaffold L5028
Number of contigs307
Contig N5035,182,712
Contig L5028
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)306

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,019,573,6153053,019,573,58135,182,71210
MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MTAllAssembled moleculeUnlocalized scaffolds16,568016,56810116,568016,56816,568016,568000000