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HG03486.alt.pat.f1_v2

Organism name:
Homo sapiens (human)
Isolate:
HG03486
Sex:
female
BioSample:
SAMN08723473
BioProject:
PRJNA727344
Submitter:
UCSC Genomics Institute
Date:
2021/05/26
Assembly type:
haploid (paternal haplotype of diploid)
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_018503245.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAHEOQ01
Assembly method:
Hifiasm v. 0.14
Expected final version:
no
Genome coverage:
39x
Sequencing technology:
PacBio Sequel
Linked assembly:
GCA_018503525.1 (maternal haplotype of diploid)

IDs: 10123411 [UID] 26915158 [GenBank]

See Genome Information for Homo sapiens

There are 1137 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length3,049,588,884
Total ungapped length3,049,588,839
Gaps between scaffolds0
Number of scaffolds519
Scaffold N5027,177,738
Scaffold L5040
Number of contigs521
Contig N5027,177,738
Contig L5040
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)519

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,049,588,8845193,049,588,83927,177,73820