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ASM1820629v1

Organism name:
Bacteroides pyogenes (CFB group bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: DD33
BioSample:
SAMN16729932
BioProject:
PRJNA676053
Submitter:
University of Calgary
Date:
2021/04/29
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_018206295.1 (latest)
RefSeq assembly accession:
GCF_018206295.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JADRGH01
Assembly method:
SPAdes v. 3.13.0
Expected final version:
yes
Genome coverage:
60x
Sequencing technology:
Illumina HiSeq

IDs: 9964691 [UID] 26537148 [GenBank] 26698888 [RefSeq]

See Genome Information for Bacteroides pyogenes

There are 36 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length3,347,772
Total ungapped length3,347,772
Number of contigs132
Contig N5065,506
Contig L5018
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)132

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,347,7721323,347,77265,50600

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Bacteroides pyogenesBacteroides pyogenes

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000428105.1Bacteroides pyogenes DSM 20611 = JCM 6294type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000428105.1Bacteroides pyogenestype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.8385.5783.69
Best-match type98.8385.5783.69

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna