U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



Sapria_himalayana_v1

Organism name:
Sapria himalayana (eudicots)
Isolate:
LCAI001
BioSample:
SAMN17108554
BioProject:
PRJNA686196
Submitter:
Harvard University
Date:
2021/02/04
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_016808135.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAEQBI01
Assembly method:
Supernova v. 2.1.1
Expected final version:
yes
Genome coverage:
60x
Sequencing technology:
Illumina NovaSeq

IDs: 9224491 [UID] 24837208 [GenBank]

See Genome Information for Sapria himalayana

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length1,276,270,856
Total ungapped length1,182,858,682
Gaps between scaffolds0
Number of scaffolds128,027
Scaffold N50952,963
Scaffold L50118
Number of contigs216,625
Contig N5019,951
Contig L5012,551
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)128,027

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,276,270,856128,0271,182,858,682952,96388,5980