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ASM1591239v1

Organism name:
Streptomyces clavuligerus (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: ATCC 27064
BioSample:
SAMN13218685
BioProject:
PRJNA587782
Submitter:
John Innes Centre
Date:
2020/12/10
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_015912395.1 (latest)
RefSeq assembly accession:
GCF_015912395.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
WKJU01
Assembly method:
SPAdes v. 3.7
Expected final version:
yes
Genome coverage:
80x
Sequencing technology:
Illumina HiSeq

IDs: 8760111 [UID] 23740488 [GenBank] 23805138 [RefSeq]

See Genome Information for Streptomyces clavuligerus

There are 31 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length8,856,659
Total ungapped length8,856,659
Number of contigs1,688
Contig N509,549
Contig L50277
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,688

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced8,856,6591,6888,856,6599,54900

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces clavuligerusStreptomyces clavuligerus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000148465.1Streptomyces clavuligerustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000148465.1Streptomyces clavuligerustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9899.6496.60
Best-match type99.9899.6496.60

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna