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Source database (GenBank or RefSeq) File type

ASM1570882v1

Organism name:

Lethenteron reissneri (Far Eastern brook lamprey)

Isolate:

LAM-NWPU_2019-01

Sex:

male

BioSample:

SAMN12436412

BioProject:

PRJNA558325

Submitter:

Center for Ecological and Environmental Sciences

Date:

2020/12/01

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_015708825.1 (latest)

RefSeq assembly accession:

GCF_015708825.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome MT

Data displayed for RefSeq version

WGS Project:

JADLOY01

Assembly method:

FALCON v. 0.7

Expected final version:

yes

Genome coverage:

96.13x

Sequencing technology:

PacBio Sequel

IDs: 8660661 [UID] 23485358 [GenBank] 50577478 [RefSeq]

See Genome Information for Lethenteron reissneri

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_015708825.1	≠	GCF_015708825.1	ASM1570882v1	Chromosome	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	1,063,028,601
Total ungapped length	1,052,292,536
Gaps between scaffolds	0
Number of scaffolds	1,946
Scaffold N50	13,487,809
Scaffold L50	33
Number of contigs	5,233
Contig N50	1,412,731
Contig L50	152
Total number of chromosomes and plasmids	73
Number of component sequences (WGS or clone)	1,946

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM027293.1	=	NC_083779.1	0
Chromosome 2	CM027294.1	=	NC_083780.1	0
Chromosome 3	CM027295.1	=	NC_083781.1	0
Chromosome 4	CM027296.1	=	NC_083782.1	0
Chromosome 5	CM027297.1	=	NC_083783.1	0
Chromosome 6	CM027298.1	=	NC_083784.1	0
Chromosome 7	CM027299.1	=	NC_083785.1	0
Chromosome 8	CM027300.1	=	NC_083786.1	0
Chromosome 9	CM027301.1	=	NC_083787.1	0
Chromosome 10	CM027302.1	=	NC_083788.1	0
Chromosome 11	CM027303.1	=	NC_083789.1	0
Chromosome 12	CM027304.1	=	NC_083790.1	0
Chromosome 13	CM027305.1	=	NC_083791.1	0
Chromosome 14	CM027306.1	=	NC_083792.1	0
Chromosome 15	CM027307.1	=	NC_083793.1	0
Chromosome 16	CM027308.1	=	NC_083794.1	0
Chromosome 17	CM027309.1	=	NC_083795.1	0
Chromosome 18	CM027310.1	=	NC_083796.1	0
Chromosome 19	CM027311.1	=	NC_083797.1	0
Chromosome 20	CM027312.1	=	NC_083798.1	0
Chromosome 21	CM027313.1	=	NC_083799.1	0
Chromosome 22	CM027314.1	=	NC_083800.1	0
Chromosome 23	CM027315.1	=	NC_083801.1	0
Chromosome 24	CM027316.1	=	NC_083802.1	0
Chromosome 25	CM027317.1	=	NC_083803.1	0
Chromosome 26	CM027318.1	=	NC_083804.1	0
Chromosome 27	CM027319.1	=	NC_083805.1	0
Chromosome 28	CM027320.1	=	NC_083806.1	0
Chromosome 29	CM027321.1	=	NC_083807.1	0
Chromosome 30	CM027322.1	=	NC_083808.1	0
Chromosome 31	CM027323.1	=	NC_083809.1	0
Chromosome 32	CM027324.1	=	NC_083810.1	0
Chromosome 33	CM027325.1	=	NC_083811.1	0
Chromosome 34	CM027326.1	=	NC_083812.1	0
Chromosome 35	CM027327.1	=	NC_083813.1	0
Chromosome 36	CM027328.1	=	NC_083814.1	0
Chromosome 37	CM027329.1	=	NC_083815.1	0
Chromosome 38	CM027330.1	=	NC_083816.1	0
Chromosome 39	CM027331.1	=	NC_083817.1	0
Chromosome 40	CM027332.1	=	NC_083818.1	0
Chromosome 41	CM027333.1	=	NC_083819.1	0
Chromosome 42	CM027334.1	=	NC_083820.1	0
Chromosome 43	CM027335.1	=	NC_083821.1	0
Chromosome 44	CM027336.1	=	NC_083822.1	0
Chromosome 45	CM027337.1	=	NC_083823.1	0
Chromosome 46	CM027338.1	=	NC_083824.1	0
Chromosome 47	CM027339.1	=	NC_083825.1	0
Chromosome 48	CM027340.1	=	NC_083826.1	0
Chromosome 49	CM027341.1	=	NC_083827.1	0
Chromosome 50	CM027342.1	=	NC_083828.1	0
Chromosome 51	CM027343.1	=	NC_083829.1	0
Chromosome 52	CM027344.1	=	NC_083830.1	0
Chromosome 53	CM027345.1	=	NC_083831.1	0
Chromosome 54	CM027346.1	=	NC_083832.1	0
Chromosome 55	CM027347.1	=	NC_083833.1	0
Chromosome 56	CM027348.1	=	NC_083834.1	0
Chromosome 57	CM027349.1	=	NC_083835.1	0
Chromosome 58	CM027350.1	=	NC_083836.1	0
Chromosome 59	CM027351.1	=	NC_083837.1	0
Chromosome 60	CM027352.1	=	NC_083838.1	0
Chromosome 61	CM027353.1	=	NC_083839.1	0
Chromosome 62	CM027354.1	=	NC_083840.1	0
Chromosome 63	CM027355.1	=	NC_083841.1	0
Chromosome 64	CM027356.1	=	NC_083842.1	0
Chromosome 65	CM027357.1	=	NC_083843.1	0
Chromosome 66	CM027358.1	=	NC_083844.1	0
Chromosome 67	CM027359.1	=	NC_083845.1	0
Chromosome 68	CM027360.1	=	NC_083846.1	0
Chromosome 69	CM027361.1	=	NC_083847.1	0
Chromosome 70	CM027362.1	=	NC_083848.1	0
Chromosome 71	CM027363.1	=	NC_083849.1	0
Chromosome 72	CM027364.1	=	NC_083850.1	0
unplaced	n/a	n/a	n/a	1,873

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	1,063,012,140	1,945	1,052,276,075	13,487,809	3,287
Chromosome 1	10,045,214	1	9,777,338	10,045,214	83
Chromosome 2	15,943,288	1	15,759,421	15,943,288	61
Chromosome 3	14,958,784	1	14,731,497	14,958,784	68
Chromosome 4	11,551,331	1	11,480,692	11,551,331	27
Chromosome 5	11,548,138	1	11,388,971	11,548,138	40
Chromosome 6	10,704,739	1	10,616,391	10,704,739	25
Chromosome 7	14,118,672	1	14,087,205	14,118,672	19
Chromosome 8	13,376,353	1	13,331,079	13,376,353	18
Chromosome 9	14,261,027	1	14,198,450	14,261,027	25
Chromosome 10	14,957,656	1	14,743,097	14,957,656	68
Chromosome 11	13,487,809	1	13,407,068	13,487,809	21
Chromosome 12	14,089,060	1	14,027,934	14,089,060	22
Chromosome 13	12,993,401	1	12,959,950	12,993,401	16
Chromosome 14	14,359,843	1	14,313,721	14,359,843	21
Chromosome 15	13,679,190	1	13,573,921	13,679,190	33
Chromosome 16	15,954,215	1	15,884,716	15,954,215	29
Chromosome 17	15,762,196	1	15,681,012	15,762,196	17
Chromosome 18	16,059,171	1	15,972,530	16,059,171	21
Chromosome 19	14,961,077	1	14,932,954	14,961,077	13
Chromosome 20	19,039,868	1	18,950,485	19,039,868	25
Chromosome 21	22,275,314	1	22,212,855	22,275,314	17
Chromosome 22	15,591,674	1	15,538,153	15,591,674	24
Chromosome 23	23,648,755	1	23,603,172	23,648,755	17
Chromosome 24	20,949,677	1	20,837,133	20,949,677	37
Chromosome 25	18,605,447	1	18,576,802	18,605,447	15
Chromosome 26	25,945,666	1	25,839,072	25,945,666	35
Chromosome 27	19,202,668	1	19,118,422	19,202,668	33
Chromosome 28	12,104,932	1	11,990,047	12,104,932	31
Chromosome 29	15,470,702	1	15,449,202	15,470,702	11
Chromosome 30	15,838,641	1	15,802,967	15,838,641	15
Chromosome 31	13,810,248	1	13,782,392	13,810,248	19
Chromosome 32	15,224,554	1	15,173,174	15,224,554	23
Chromosome 33	16,274,022	1	16,239,362	16,274,022	13
Chromosome 34	16,961,846	1	16,881,648	16,961,846	25
Chromosome 35	14,118,812	1	14,061,559	14,118,812	16
Chromosome 36	13,921,333	1	13,859,945	13,921,333	20
Chromosome 37	14,646,344	1	14,598,727	14,646,344	15
Chromosome 38	12,931,943	1	12,880,077	12,931,943	13
Chromosome 39	12,930,715	1	12,883,939	12,930,715	22
Chromosome 40	13,103,736	1	12,930,737	13,103,736	51
Chromosome 41	13,032,412	1	13,007,547	13,032,412	8
Chromosome 42	13,037,502	1	13,024,837	13,037,502	11
Chromosome 43	12,842,547	1	12,819,731	12,842,547	9
Chromosome 44	14,059,923	1	13,988,085	14,059,923	20
Chromosome 45	11,757,133	1	11,711,750	11,757,133	27
Chromosome 46	12,593,966	1	12,523,115	12,593,966	20
Chromosome 47	12,024,177	1	11,944,359	12,024,177	26
Chromosome 48	11,380,638	1	11,316,197	11,380,638	23
Chromosome 49	11,460,306	1	11,394,486	11,460,306	24
Chromosome 50	11,882,248	1	11,663,635	11,882,248	68
Chromosome 51	12,782,737	1	12,683,157	12,782,737	48
Chromosome 52	11,850,109	1	11,659,538	11,850,109	55
Chromosome 53	11,444,930	1	11,242,122	11,444,930	55
Chromosome 54	12,722,365	1	12,577,477	12,722,365	42
Chromosome 55	13,232,832	1	13,098,918	13,232,832	49
Chromosome 56	10,409,013	1	10,172,814	10,409,013	73
Chromosome 57	10,476,279	1	10,205,008	10,476,279	75
Chromosome 58	11,622,556	1	11,424,047	11,622,556	49
Chromosome 59	8,068,690	1	7,829,774	8,068,690	56
Chromosome 60	9,795,884	1	9,459,617	9,795,884	92
Chromosome 61	9,956,413	1	9,672,259	9,956,413	75
Chromosome 62	6,842,183	1	6,637,249	6,842,183	64
Chromosome 63	9,934,276	1	9,585,172	9,934,276	81
Chromosome 64	13,689,159	1	13,454,513	13,689,159	74
Chromosome 65	13,569,073	1	13,335,397	13,569,073	65
Chromosome 66	8,518,039	1	8,327,907	8,518,039	62
Chromosome 67	9,211,501	1	8,839,755	9,211,501	105
Chromosome 68	7,716,302	1	7,423,654	7,716,302	81
Chromosome 69	11,276,164	1	10,940,410	11,276,164	92
Chromosome 70	4,531,071	1	4,273,536	4,531,071	76
Chromosome 71	4,939,777	1	4,700,624	4,939,777	68
Chromosome 72	7,714,420	1	7,552,379	7,714,420	54
unplaced	103,229,454	1,873	101,709,189	138,344	456

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ASM1570882v1

See Genome Information for Lethenteron reissneri

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

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Assembly Unit Name
Primary Assembly
non-nuclear