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Source database (GenBank or RefSeq) File type

ASM1465609v1

Organism name:: Streptomyces longispororuber (high G+C Gram-positive bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: JCM 4784
BioSample:: SAMD00245516
BioProject:: PRJDB10510
Submitter:: WFCC-MIRCEN World Data Centre for Microorganisms (WDCM)
Date:: 2020/09/12
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
RefSeq category:: representative genome
Relation to type material:: assembly from type material
GenBank assembly accession:: GCA_014656095.1 (latest)
RefSeq assembly accession:: GCF_014656095.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: BNBT01
Assembly method:: gcType assembly pipeline
Genome coverage:: 80X
Sequencing technology:: Illumina HiSeq X Ten

IDs: 8124661 [UID] 22199298 [GenBank] 22234438 [RefSeq]

See Genome Information for Streptomyces longispororuber

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_014656095.1	=	GCF_014656095.1	ASM1465609v1	Scaffold	Latest GenBank, Latest RefSeq

Comment

Genome sequencing and analysis were conducted under the Global Catalogue of Microorganisms (GCM) 10K type strain sequencing project (http://gctype.wdcm.org). The genomic data are also available at http://gctype.wdcm.org/sequencing/GCM10018785 

Annotated by DFAST v.1.2.7 (https://dfast.nig.ac.jp)

Global statistics

Total sequence length	9,078,602
Total ungapped length	9,077,320
Gaps between scaffolds	0
Number of scaffolds	354
Scaffold N50	45,204
Scaffold L50	59
Number of contigs	368
Contig N50	43,983
Contig L50	61
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	354

	ANI	Query coverage	Subject coverage
Declared type	na	na	na
Best-match type	88.90	61.72	57.13

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ASM1465609v1

See Genome Information for Streptomyces longispororuber

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

Comment

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Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

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