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C_macrorhynchos_scaffold_01

Organism name:
Corvus macrorhynchos (Large-billed crow)
BioSample:
SAMD00237434
BioProject:
PRJDB10193
Submitter:
Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies
Date:
2020/08/22
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_014363025.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
BMBD01
Assembly method:
Genomic Workbench v. 20.02
Genome coverage:
58X
Sequencing technology:
Illumina Novaseq6000

IDs: 7976341 [UID] 21870998 [GenBank]

See Genome Information for Corvus macrorhynchos

History (Show revision history)

Comment

Original tissue is stored at NIES

Global statistics

Total sequence length1,018,435,877
Total ungapped length1,014,848,942
Gaps between scaffolds0
Number of scaffolds16,523
Scaffold N50133,802
Scaffold L502,023
Number of contigs48,959
Contig N5052,265
Contig L505,217
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)16,523

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,018,435,87716,5231,014,848,942133,80232,4360