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mMyoMyo1.p

Organism name:
Myotis myotis (bats)
Isolate:
mMyoMyo1
Sex:
female
BioSample:
SAMN14734277
BioProject:
PRJNA628559
Submitter:
Bat1K
Date:
2020/08/07
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_014108235.1 (latest)
RefSeq assembly accession:
GCF_014108235.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Different: chromosome MT.
  • Data displayed for RefSeq version
WGS Project:
JABWUV01
Assembly method:
DAmar v. APRIL-2019; Bionano Solve DLS v. 3.3; Salsa2 HiC v. git commit: e3ae7d8; GenomicConsensus v. git commit: 038de5c; longranger align v. 2.2.0; Freebayes v. 1.2.0; HiGlass manual curation v. 1.5
Expected final version:
no
Genome coverage:
90.9x
Sequencing technology:
PacBio Sequel CLR; 10X Genomics chromium linked reads; Bionano Genomics; Phase Genomics HiC; PacBio Sequel IsoSeq

IDs: 7872011 [UID] 21572738 [GenBank] 22289458 [RefSeq]

See Genome Information for Myotis myotis

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,002,797,769
Total ungapped length1,973,844,364
Gaps between scaffolds0
Number of scaffolds93
Scaffold N5094,448,911
Scaffold L507
Number of contigs631
Contig N5012,511,134
Contig L5041
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)93

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,002,780,556921,973,827,15194,448,9115380
MoleculeTotal
Length
Mitochondrion MT17,213
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