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ASM1335033v1

Organism name:
Chimonanthus salicifolius (flowering plants)
Isolate:
LYLM-1
BioSample:
SAMN13895404
BioProject:
PRJNA602413
Submitter:
Shanghai Normal University
Date:
2020/06/18
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_013350335.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAAGOE01
Assembly method:
FALCON v. 0.3; Pilon v. 1.16; FragScaff v. 140324.1; LACHESIS v. 1
Expected final version:
yes
Genome coverage:
532.0x
Sequencing technology:
PacBio; Illumina; 10X Genomics; Hi-C

IDs: 7287971 [UID] 20100318 [GenBank]

See Genome Information for Chimonanthus salicifolius

History (Show revision history)

Comment

Global statistics

Total sequence length853,434,300
Total ungapped length853,324,400
Gaps between scaffolds0
Number of scaffolds689
Scaffold N5075,742,658
Scaffold L506
Number of contigs1,788
Contig N502,121,821
Contig L50111
Total number of chromosomes and plasmids11
Number of component sequences (WGS or clone)689

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_013350405.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM023532.1n/an/a0
Chromosome 2CM023533.1n/an/a0
Chromosome 3CM023534.1n/an/a0
Chromosome 4CM023535.1n/an/a0
Chromosome 5CM023536.1n/an/a0
Chromosome 6CM023537.1n/an/a0
Chromosome 7CM023538.1n/an/a0
Chromosome 8CM023539.1n/an/a0
Chromosome 9CM023540.1n/an/a0
Chromosome 10CM023541.1n/an/a0
Chromosome 11CM023542.1n/an/a0
unplacedn/an/an/a678

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All853,434,300689853,324,40075,742,6581,0990
Chromosome 197,707,930197,687,93097,707,9302000
Chromosome 281,389,424181,380,42481,389,424900
Chromosome 379,316,750179,308,65079,316,750810
Chromosome 478,902,607178,895,80778,902,607680
Chromosome 576,334,094176,324,29476,334,094980
Chromosome 675,742,658175,730,45875,742,6581220
Chromosome 771,579,036171,568,23671,579,0361080
Chromosome 871,319,913171,310,41371,319,913950
Chromosome 969,069,121169,062,22169,069,121690
Chromosome 1067,592,591167,583,39167,592,591920
Chromosome 1151,166,871151,159,27151,166,871760
unplaced33,313,30567833,313,30570,50000