U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



VDG2_1.0

Organism name:
Verticillium dahliae VDG2 (ascomycete fungi)
Infraspecific name:
Strain: VDG2
BioSample:
SAMN14096570
BioProject:
PRJNA66031
Submitter:
Institute of Crop Science, Chinese Academy of Agricultural Sciences
Date:
2020/02/24
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_011066485.2 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
AFMQ01
Assembly method:
SOAP v. 2.0
Genome coverage:
114x
Sequencing technology:
Illumina GAIIx

IDs: 9506351 [UID] 25500408 [GenBank]

See Genome Information for Verticillium dahliae

There are 47 assemblies for this organism

See more

History (Show revision history)

Comment

Fungi isolates available from Xiaofeng Dai Ph.D., Institute of Crop Science, Chinese Academy of Agricultural Sciences

Global statistics

Total sequence length34,171,673
Total ungapped length33,064,502
Gaps between scaffolds0
Number of scaffolds650
Scaffold N501,040,054
Scaffold L5011
Number of contigs3,543
Contig N5028,800
Contig L50349
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)3,543

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced34,171,67365033,064,5021,040,0542,8930