U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



BGI_CrCroc_1.0

Organism name:
Crocuta crocuta (spotted hyena)
Isolate:
KB4526
Sex:
male
BioSample:
SAMN12283067
BioProject:
PRJNA554753
Submitter:
BGI
Date:
2019/10/07
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_008692635.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
VOAJ01
Assembly method:
SOAPdenovo v. 1.06
Expected final version:
no
Genome coverage:
95.2x
Sequencing technology:
Illumina HiSeq

IDs: 4791181 [UID] 14240118 [GenBank]

See Genome Information for Crocuta crocuta

History (Show revision history)

Comment

Annotation was added in January 2020.

Global statistics

Total sequence length2,348,377,234
Total ungapped length2,326,947,288
Gaps between scaffolds0
Number of scaffolds24,679
Scaffold N507,236,831
Scaffold L50105
Number of contigs97,579
Contig N5097,873
Contig L506,667
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)24,679

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,348,360,37624,6782,326,930,4307,236,83172,9000
MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MT16,858116,85816,85800
Support Center