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ASM863263v1

Organism name:: Acinetobacter baumannii (g-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: K09-14
BioSample:: SAMN12769618
BioProject:: PRJNA565663
Submitter:: Nanyang Technological University
Date:: 2019/09/23
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_008632635.1 (latest)
RefSeq assembly accession:: GCF_008632635.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
Assembly method:: UniCycler v. Galaxy version 0.4.6.0
Expected final version:: yes
Genome coverage:: 568.0x
Sequencing technology:: Illumina HiSeq; Oxford Nanopore MiniION

IDs: 4689851 [UID] 14002628 [GenBank] 14087248 [RefSeq]

See Genome Information for Acinetobacter baumannii

Pathogen Detection Resources

There are 26584 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_008632635.1	=	GCF_008632635.1	ASM863263v1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

Bacteria and source DNA available from LKCMedicine Microbial Repository, Lee Kong Chian School of Medicine, Nanyang Technological University, 11 Mandalay Road, Singapore 308232
The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be ... found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/  more

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Date::01/09/2024 08:56:29
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::3,736
CDSs (total)::3,642
Genes (coding)::3,599
CDSs (with protein)::3,599
Genes (RNA)::94
rRNAs::6, 6, 6 (5S, 16S, 23S)
complete rRNAs::6, 6, 6 (5S, 16S, 23S)
tRNAs::72
ncRNAs::4
Pseudo Genes (total)::43
CDSs (without protein)::43
Pseudo Genes (ambiguous residues)::0 of 43
Pseudo Genes (frameshifted)::19 of 43
Pseudo Genes (incomplete)::26 of 43
Pseudo Genes (internal stop)::10 of 43
Pseudo Genes (multiple problems)::11 of 43
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	3,980,230
Total ungapped length	3,980,230
Total number of chromosomes and plasmids	2

Molecule name	GenBank sequence		RefSeq sequence
Chromosome	CP043953.1	=	NZ_CP043953.1
Plasmid pK09-14	CP043954.1	=	NZ_CP043954.1

Molecule	Total Length
All	3,980,230
Chromosome	3,972,439
Plasmid pK09-14	7,791

	ANI	Query coverage	Subject coverage
Declared type	97.95	89.40	88.98
Best-match type	97.95	89.40	88.98

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ASM863263v1

See Genome Information for Acinetobacter baumannii

Pathogen Detection Resources

There are 26584 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

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