U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



Try the new Datasets Genome page

MacCal_v1_BIUU

Organism name:
Macrotus californicus (California big-eared bat)
Isolate:
US035
BioSample:
SAMN07678130
BioProject:
PRJNA399440
Submitter:
Broad Institute
Date:
2019/08/08
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_007922815.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
VMDR01
Assembly method:
Discovar v. discovardenovo-52488
Expected final version:
yes
Genome coverage:
47.7x
Sequencing technology:
Illumina HiSeq

IDs: 4301371 [UID] 13114528 [GenBank]

See Genome Information for Macrotus californicus

History (Show revision history)

Comment

Global statistics

Total sequence length2,161,582,626
Total ungapped length2,161,368,426
Gaps between scaffolds0
Number of scaffolds1,128,787
Scaffold N5016,925
Scaffold L5021,311
Number of contigs1,130,929
Contig N5016,386
Contig L5022,837
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)1,128,787

Supplemental Content

Recent activity

Your browsing activity is temporarily unavailable.

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,160,653,7561,125,4302,160,439,55616,9482,1420
MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MTAllAssembled moleculeUnlocalized scaffolds928,8700928,8703,35703,357928,8700928,8703470347000000
Support Center