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PedCap_v1_BIUU

Organism name:
Pedetes capensis (springhare)
Isolate:
US022
BioSample:
SAMN07678104
BioProject:
PRJNA399412
Submitter:
Broad Institute
Date:
2019/08/08
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_007922755.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
VMDO01
Assembly method:
Discovar v. discovardenovo-52488
Expected final version:
yes
Genome coverage:
39.7x
Sequencing technology:
Illumina HiSeq

IDs: 4301351 [UID] 13114458 [GenBank]

See Genome Information for Pedetes capensis

History (Show revision history)

Comment

Global statistics

Total sequence length2,850,076,812
Total ungapped length2,848,690,112
Gaps between scaffolds0
Number of scaffolds673,563
Scaffold N5074,432
Scaffold L509,923
Number of contigs687,430
Contig N5054,009
Contig L5014,357
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)673,563

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,850,076,812673,5632,848,690,11274,43213,8670
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