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SESE.1.0

Organism name:: Sequoia sempervirens (seed plants)
Isolate:: SESE104
BioSample:: SAMN11654426
BioProject:: PRJNA542879
Submitter:: Johns Hopkins University
Date:: 2019/07/29
Assembly level:: Scaffold
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_007258455.1 (latest)
RefSeq assembly accession:: n/a
RefSeq assembly and GenBank assembly identical:: n/a
WGS Project:: VDFB01
Assembly method:: MaSuRCA v. 3.2.8
Expected final version:: no
Genome coverage:: 144.0x
Sequencing technology:: Illumina HiSeq; Oxford Nanopore PromethION

IDs: 4135941 [UID] 12711658 [GenBank]

See Genome Information for Sequoia sempervirens

History (Show revision history)

Global statistics

Total sequence length	26,537,244,740
Total ungapped length	26,454,275,906
Gaps between scaffolds	0
Number of scaffolds	517,852
Scaffold N50	110,425
Scaffold L50	54,396
Number of contigs	548,916
Contig N50	97,163
Contig L50	61,057
Total number of chromosomes and plasmids	2
Number of component sequences (WGS or clone)	517,852

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Assembly Information

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SESE.1.0 - Genome - Assembly - NCBI
SESE.1.0 - Genome - Assembly - NCBI

Assembly

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Assembly Definition
Assembly Statistics

Global assembly definition

Download the full sequence report

Click on the table row to see sequence details in the table to the right

Assembly Unit Name
Primary Assembly
non-nuclear

Assembly Unit: Primary Assembly (GCA_007258465.1)

This assembly-unit does not have any assembled chromosomes or linkage groups. Please download the full sequence report for information on the scaffolds.

Assembly statistics

Primary Assembly
non-nuclear

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps	Unspanned Gaps
All	26,534,885,002	517,819	26,451,918,581	110,429	31,063	0

Molecule	Sequence Role	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps	Unspanned Gaps
All	Assembled molecule	2,359,738	33	2,357,325	83,415	1	0
Mitochondrion MT	AllAssembled moleculeUnlocalized scaffolds	2,225,92202,225,922	32032	2,223,50902,223,509	83,415083,415	101	000
Chloroplast Pltd	Assembled molecule	133,816	1	133,816	133,816	0	0

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