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UP_Adux

Organism name:
Architeuthis dux (giant squid)
Isolate:
ADU-2019
BioSample:
SAMN11565558
BioProject:
PRJNA534469
Submitter:
CIIMAR - Interdisciplinary Centre of Marine and Environmental Research
Date:
2019/06/26
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_006491835.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
VCCN01
Assembly method:
Meraculous v. MAY-2015
Expected final version:
yes
Genome coverage:
126.0x
Sequencing technology:
Illumina HiSeq; Chicago and Dovetail Hi-C

IDs: 3565951 [UID] 11525538 [GenBank]

See Genome Information for Architeuthis dux

History (Show revision history)

Comment

Global statistics

Total sequence length2,693,618,964
Total ungapped length2,242,100,778
Gaps between scaffolds0
Number of scaffolds7,373
Scaffold N504,852,590
Scaffold L50160
Number of contigs681,943
Contig N505,397
Contig L50114,664
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)7,373

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,693,618,9647,3732,242,100,7784,852,590674,5700