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SspV1

Organism name:
Salvia splendens (eudicots)
Isolate:
huo1
BioSample:
SAMN08162997
BioProject:
PRJNA422035
Submitter:
Beijing Forestry University
Date:
2019/03/26
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_004379255.1 (replaced)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PNBA01
Assembly method:
CANU v. 1.5
Expected final version:
no
Genome coverage:
63.0x
Sequencing technology:
PacBio

IDs: 2360561 [UID] 8797958 [GenBank]

See Genome Information for Salvia splendens

History (Show revision history)

Comment

Global statistics

Total sequence length809,159,598
Total ungapped length807,514,970
Gaps between scaffolds0
Number of scaffolds1,525
Scaffold N503,123,266
Scaffold L5073
Number of contigs2,051
Contig N502,340,816
Contig L5096
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)1,525

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced808,915,1481,521807,292,8633,123,2665230
MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MTAllAssembled moleculeUnlocalized scaffolds244,4500244,450404222,1070222,10776,262076,262303000