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TupTan_v1_BIUU

Organism name:
Tupaia tana (large tree shrew)
Isolate:
BS70
BioSample:
SAMN07678117
BioProject:
PRJNA399462
Submitter:
Broad Institute
Date:
2019/03/22
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_004365275.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
RJWV01
Assembly method:
DISCOVAR de novo v. discovardenovo-52488
Expected final version:
yes
Genome coverage:
25x
Sequencing technology:
Illumina HiSeq

IDs: 2353541 [UID] 8772978 [GenBank]

See Genome Information for Tupaia tana

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length3,648,908,809
Total ungapped length3,648,262,209
Gaps between scaffolds0
Number of scaffolds3,883,620
Scaffold N502,973
Scaffold L50217,221
Number of contigs3,890,086
Contig N502,971
Contig L50223,828
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)3,883,620

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,648,908,8093,883,6203,648,262,2092,9736,4660
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