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PerLonPac_v1_BIUU

Organism name:
Perognathus longimembris pacificus (Pacific pocket mouse)
Isolate:
BS65
Sex:
male
BioSample:
SAMN07678105
BioProject:
PRJNA399459
Submitter:
Broad Institute
Date:
2019/03/22
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_004363475.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
RJWR01
Assembly method:
DISCOVAR de novo v. discovardenovo-52488
Expected final version:
yes
Genome coverage:
59.6x
Sequencing technology:
Illumina HiSeq

IDs: 2353131 [UID] 8771138 [GenBank]

See Genome Information for Perognathus longimembris

There are 4 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,601,695,796
Total ungapped length2,599,815,696
Gaps between scaffolds0
Number of scaffolds2,409,818
Scaffold N5024,714
Scaffold L5023,202
Number of contigs2,428,619
Contig N5017,686
Contig L5034,665
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)2,409,818

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,601,695,7962,409,8182,599,815,69624,71418,8010
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