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ASM413651v2

Organism name:
Anopheles coluzzii (mosquitos)
Isolate:
Ngousso colony
Sex:
female
BioSample:
SAMN10528920
BioProject:
PRJNA508774
Submitter:
Pacific Biosciences
Date:
2019/02/06
Assembly type:
diploid
Release type:
minor
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_004136515.2 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
RWKB01
Assembly method:
FALCON-Unzip v. Aug-2018
Expected final version:
yes
Genome coverage:
48.0x
Sequencing technology:
PacBio Sequel

IDs: 2229641 [UID] 8401388 [GenBank]

See Genome Information for Anopheles coluzzii

There are 2 assemblies for this organism

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History (Show revision history)

Comment

This is a diploid assembly of Anopheles coluzzii. The contigs of the primary assembly are located in RWKB01000001-RWKB01000206. The alternative haploid contigs (haplotigs) are located in RWKB01000207-RWKB01001035.

Global statistics*

Total sequence length251,398,820
Total ungapped length251,398,820
Number of contigs205
Contig N503,468,756
Contig L5022
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)205

*Note: Statistics shown for the primary assembly-unit. See the statistics report for additional statistics.

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
haplotigs
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced251,398,820205251,398,8203,468,75600
MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced89,142,05882989,142,058198,64900
MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MT15,365115,36515,36500
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