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CapPil_v1_BIUU

Organism name:
Capromys pilorides (Desmarest's hutia)
Isolate:
US015
Sex:
female
BioSample:
SAMN07678066
BioProject:
PRJNA399377
Submitter:
Broad Institute
Date:
2019/01/16
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_004027915.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PVKN01
Assembly method:
DISCOVAR de novo v. discovardenovo-52488
Expected final version:
yes
Genome coverage:
26.1x
Sequencing technology:
Illumina HiSeq

IDs: 2212011 [UID] 8252558 [GenBank]

See Genome Information for Capromys pilorides

History (Show revision history)

Comment

Global statistics

Total sequence length3,023,850,356
Total ungapped length3,023,501,156
Gaps between scaffolds0
Number of scaffolds2,352,358
Scaffold N504,081
Scaffold L50146,424
Number of contigs2,355,850
Contig N504,080
Contig L50149,962
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)2,352,358

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,023,850,3562,352,3583,023,501,1564,0813,4920
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