U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



Try the new Datasets Genome page

CroInd_v1_BIUU

Organism name:
Crocidura indochinensis (insectivores)
Isolate:
US011
BioSample:
SAMN07678044
BioProject:
PRJNA399360
Submitter:
Broad Institute
Date:
2019/01/16
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_004027635.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PVKC01
Assembly method:
DISCOVAR de novo v. discovardenovo-52488
Expected final version:
yes
Genome coverage:
32.2x
Sequencing technology:
Illumina HiSeq

IDs: 2211901 [UID] 8252268 [GenBank]

See Genome Information for Crocidura indochinensis

History (Show revision history)

Comment

Global statistics

Total sequence length3,082,217,326
Total ungapped length3,081,690,626
Gaps between scaffolds0
Number of scaffolds2,415,412
Scaffold N504,929
Scaffold L50122,084
Number of contigs2,420,679
Contig N504,927
Contig L50127,396
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)2,415,412

Supplemental Content

Recent activity

Your browsing activity is temporarily unavailable.

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,082,217,3262,415,4123,081,690,6264,9295,2670
Support Center