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CriGam_v1_BIUU

Organism name:
Cricetomys gambianus (Gambian giant pouched rat)
Isolate:
US082
BioSample:
SAMN07678025
BioProject:
PRJNA399436
Submitter:
Broad Institute
Date:
2019/01/16
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_004027575.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PVKD01
Assembly method:
DISCOVAR de novo v. discovardenovo-52488
Expected final version:
yes
Genome coverage:
36.7x
Sequencing technology:
Illumina HiSeq

IDs: 2211821 [UID] 8252208 [GenBank]

See Genome Information for Cricetomys gambianus

History (Show revision history)

Comment

Global statistics

Total sequence length2,397,721,602
Total ungapped length2,396,974,302
Gaps between scaffolds0
Number of scaffolds1,102,952
Scaffold N50110,049
Scaffold L505,340
Number of contigs1,110,425
Contig N5080,761
Contig L507,273
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,102,952

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,397,721,6021,102,9522,396,974,302110,0497,4730
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