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OnyTor_v1_BIUU

Organism name:
Onychomys torridus (southern grasshopper mouse)
Isolate:
US017
BioSample:
SAMN07678022
BioProject:
PRJNA399348
Submitter:
Broad Institute
Date:
2019/01/16
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_004026725.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PVIT01
Assembly method:
DISCOVAR de novo v. discovardenovo-52488
Expected final version:
yes
Genome coverage:
46.8x
Sequencing technology:
Illumina HiSeq

IDs: 2211471 [UID] 8251398 [GenBank]

See Genome Information for Onychomys torridus

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length3,202,219,269
Total ungapped length3,201,164,269
Gaps between scaffolds0
Number of scaffolds2,261,735
Scaffold N5020,878
Scaffold L5035,645
Number of contigs2,272,285
Contig N5018,287
Contig L5041,931
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)2,261,735

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,202,219,2692,261,7353,201,164,26920,87810,5500
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