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RhiPru_v1_BIUU

Organism name:
Rhizomys pruinosus (hoary bamboo rat)
Isolate:
US103
BioSample:
SAMN07678150
BioProject:
PRJNA399452
Submitter:
Broad Institute
Date:
2019/01/16
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_004026225.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PVIM01
Assembly method:
DISCOVAR de novo v. discovardenovo-52488
Expected final version:
yes
Genome coverage:
25.5x
Sequencing technology:
Illumina HiSeq

IDs: 2211211 [UID] 8250898 [GenBank]

See Genome Information for Rhizomys pruinosus

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length3,937,265,448
Total ungapped length3,937,169,248
Gaps between scaffolds0
Number of scaffolds4,150,536
Scaffold N502,627
Scaffold L50376,484
Number of contigs4,151,498
Contig N502,627
Contig L50377,439
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)4,150,536

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,937,265,4484,150,5363,937,169,2482,6279620
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