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ThrSwi_v1_BIUU

Organism name:
Thryonomys swinderianus (Greater cane rat)
Isolate:
US090
BioSample:
SAMN07678129
BioProject:
PRJNA399470
Submitter:
Broad Institute
Date:
2019/01/15
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_004025085.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PVIC01
Assembly method:
DISCOVAR de novo v. discovardenovo-52488
Expected final version:
yes
Genome coverage:
58.2x
Sequencing technology:
Illumina HiSeq

IDs: 2210741 [UID] 8247778 [GenBank]

See Genome Information for Thryonomys swinderianus

History (Show revision history)

Comment

Global statistics

Total sequence length2,662,148,533
Total ungapped length2,661,266,033
Gaps between scaffolds0
Number of scaffolds1,889,641
Scaffold N5021,523
Scaffold L5031,098
Number of contigs1,898,466
Contig N5018,955
Contig L5035,727
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,889,641

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,662,148,5331,889,6412,661,266,03321,5238,8250
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