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XerIna_v1_BIUU

Organism name:
Xerus inauris (South African ground squirrel)
Isolate:
US057
BioSample:
SAMN07678119
BioProject:
PRJNA399425
Submitter:
Broad Institute
Date:
2019/01/15
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_004024805.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PVHX01
Assembly method:
DISCOVAR de novo v. discovardenovo-52488
Expected final version:
yes
Genome coverage:
24.4x
Sequencing technology:
Illumina HiSeq

IDs: 2210571 [UID] 8247498 [GenBank]

See Genome Information for Xerus inauris

History (Show revision history)

Comment

Global statistics

Total sequence length2,601,418,404
Total ungapped length2,600,443,904
Gaps between scaffolds0
Number of scaffolds577,370
Scaffold N5083,865
Scaffold L508,399
Number of contigs587,115
Contig N5064,054
Contig L5010,993
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)577,370

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,601,418,404577,3702,600,443,90483,8659,7450
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