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ZapHud_v1_BIUU

Organism name:
Zapus hudsonius (meadow jumping mouse)
Isolate:
BS14
BioSample:
SAMN07678139
BioProject:
PRJNA399434
Submitter:
Broad Institute
Date:
2019/01/15
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_004024765.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PVHP01
Assembly method:
DISCOVAR de novo v. discovardenovo-52488
Expected final version:
yes
Genome coverage:
50.1x
Sequencing technology:
Illumina HiSeq

IDs: 2210591 [UID] 8247458 [GenBank]

See Genome Information for Zapus hudsonius

History (Show revision history)

Comment

Global statistics

Total sequence length2,611,189,839
Total ungapped length2,610,428,839
Gaps between scaffolds0
Number of scaffolds1,158,100
Scaffold N5026,350
Scaffold L5024,542
Number of contigs1,165,710
Contig N5023,350
Contig L5028,152
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,158,100

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,611,189,8391,158,1002,610,428,83926,3507,6100
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