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DipSte_v1_BIUU

Organism name:
Dipodomys stephensi (Stephens's kangaroo rat)
Isolate:
BS19
BioSample:
SAMN07678080
BioProject:
PRJNA399390
Submitter:
Broad Institute
Date:
2019/01/15
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_004024685.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PVHN01
Assembly method:
DISCOVAR de novo v. discovardenovo-52488
Expected final version:
yes
Genome coverage:
59.2x
Sequencing technology:
Illumina HiSeq

IDs: 2210551 [UID] 8247378 [GenBank]

See Genome Information for Dipodomys stephensi

History (Show revision history)

Comment

Global statistics

Total sequence length2,346,418,196
Total ungapped length2,345,529,996
Gaps between scaffolds0
Number of scaffolds1,269,643
Scaffold N5036,811
Scaffold L5016,981
Number of contigs1,278,525
Contig N5030,710
Contig L5020,403
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,269,643

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,346,418,1961,269,6432,345,529,99636,8118,8820
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