U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



Try the new Datasets Genome page

PteBra_v1_BIUU

Organism name:
Pteronura brasiliensis (giant otter)
Isolate:
BS51
BioSample:
SAMN07678049
BioProject:
PRJNA399365
Submitter:
Broad Institute
Date:
2019/01/15
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_004024605.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PJEN01
Assembly method:
DISCOVAR de novo v. 52488
Expected final version:
yes
Genome coverage:
47.7x
Sequencing technology:
Illumina HiSeq

IDs: 2210501 [UID] 8247298 [GenBank]

See Genome Information for Pteronura brasiliensis

History (Show revision history)

Comment

Global statistics

Total sequence length2,602,275,310
Total ungapped length2,601,532,210
Gaps between scaffolds0
Number of scaffolds644,728
Scaffold N50119,023
Scaffold L505,906
Number of contigs652,159
Contig N5090,879
Contig L507,780
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)644,728

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,602,275,310644,7282,601,532,210119,0237,4310
Support Center