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PanOnc_v1_BIUU

Organism name:
Panthera onca (jaguar)
Isolate:
BS21
Sex:
male
BioSample:
SAMN07678103
BioProject:
PRJNA399411
Submitter:
Broad Institute
Date:
2019/01/15
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_004023805.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PISV01
Assembly method:
DISCOVAR de novo v. 52488
Expected final version:
yes
Genome coverage:
60.7x
Sequencing technology:
Illumina HiSeq

IDs: 2210101 [UID] 8246498 [GenBank]

See Genome Information for Panthera onca

History (Show revision history)

Comment

Global statistics

Total sequence length2,504,534,411
Total ungapped length2,502,401,511
Gaps between scaffolds0
Number of scaffolds438,792
Scaffold N50116,574
Scaffold L506,057
Number of contigs460,121
Contig N5062,836
Contig L5011,626
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)438,792

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,504,534,411438,7922,502,401,511116,57421,3290
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