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ASM377452v2

Organism name:
Mus musculus (house mouse)
Infraspecific name:
Strain: C57BL/6J
Isolate:
Eve
Sex:
female
BioSample:
SAMN04871431
BioProject:
PRJNA318985
Submitter:
Jackson Laboratory
Date:
2018/11/19
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_003774525.2 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
LXEJ02
Assembly method:
Celera Assembler v. 8.3; Bionano Hybrid scaffolding pipeline v. 4.0
Expected final version:
no
Genome coverage:
60.0x
Sequencing technology:
PacBio

IDs: 2109541 [UID] 7878208 [GenBank]

See Genome Information for Mus musculus

Pathogen Detection Resources

There are 24 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,801,301,292
Total ungapped length2,537,631,632
Gaps between scaffolds0
Number of scaffolds12,661
Scaffold N501,291,016
Scaffold L50585
Number of contigs36,193
Contig N50391,273
Contig L501,624
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)12,661

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
All2,801,301,29212,6612,537,631,6321,291,01623,5320
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