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ASM371315v1

Organism name:
Arachis hypogaea (peanut)
Infraspecific name:
Cultivar: Shitouqi
BioSample:
SAMN09628890
BioProject:
PRJNA480120
Submitter:
International peanut genome project
Date:
2018/07/20
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_003713155.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
Assembly method:
FALCON v. 2017-06
Expected final version:
yes
Genome coverage:
100.0x
Sequencing technology:
PacBio

IDs: 2078281 [UID] 7804748 [GenBank]

See Genome Information for Arachis hypogaea

There are 8 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,506,713,456
Total ungapped length2,506,086,556
Gaps between scaffolds0
Number of scaffolds20
Scaffold N50135,085,854
Scaffold L509
Number of contigs6,289
Contig N501,310,399
Contig L50562
Total number of chromosomes and plasmids20
Number of component sequences (WGS or clone)20

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_003713165.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome A01CP030983.1n/an/a
Chromosome B01CP030993.1n/an/a
Chromosome A02CP030984.1n/an/a
Chromosome B02CP030994.1n/an/a
Chromosome A03CP030985.1n/an/a
Chromosome B03CP030995.1n/an/a
Chromosome A04CP030986.1n/an/a
Chromosome B04CP030996.1n/an/a
Chromosome A05CP030987.1n/an/a
Chromosome B05CP030997.1n/an/a
Chromosome A06CP030988.1n/an/a
Chromosome B06CP030998.1n/an/a
Chromosome A07CP030989.1n/an/a
Chromosome B07CP030999.1n/an/a
Chromosome A08CP030990.1n/an/a
Chromosome B08CP031000.1n/an/a
Chromosome A09CP030991.1n/an/a
Chromosome B09CP031001.1n/an/a
Chromosome A10CP030992.1n/an/a
Chromosome B10CP031002.1n/an/a

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All2,506,713,456202,506,086,556135,085,8546,2690
Chromosome A01111,624,2531111,599,253111,624,2532500
Chromosome B01149,379,5731149,348,173149,379,5733140
Chromosome A0299,791,824199,758,62499,791,8243320
Chromosome B02122,213,7871122,185,787122,213,7872800
Chromosome A03143,206,5171143,170,717143,206,5173580
Chromosome B03150,766,1901150,735,790150,766,1903040
Chromosome A04122,064,7221122,032,022122,064,7223270
Chromosome B04135,085,8541135,053,454135,085,8543240
Chromosome A05116,166,8841116,131,084116,166,8843580
Chromosome B05153,119,0991153,081,199153,119,0993790
Chromosome A06109,264,8271109,232,527109,264,8273230
Chromosome B06153,789,0611153,751,161153,789,0613790
Chromosome A0783,117,376183,092,07683,117,3762530
Chromosome B07132,998,8791132,966,279132,998,8793260
Chromosome A0851,955,169151,945,66951,955,169950
Chromosome B08136,776,5031136,738,803136,776,5033770
Chromosome A09121,058,9541121,033,754121,058,9542520
Chromosome B09159,154,9991159,117,899159,154,9993710
Chromosome A10114,519,8691114,481,669114,519,8693820
Chromosome B10140,659,1161140,630,616140,659,1162850
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