ASM366752v1

Organism name:: Mycetocola reblochoni (high G+C Gram-positive bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: JCM 30549
BioSample:: SAMN10234928
BioProject:: PRJNA495926
Submitter:: Chinese center for disease control and prevention
Date:: 2018/10/21
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
Relation to type material:: assembly from type material
GenBank assembly accession:: GCA_003667525.1 (latest)
RefSeq assembly accession:: GCF_003667525.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: RCUW01
Assembly method:: SOAPdenovo v. 4.0
Expected final version:: yes
Genome coverage:: 40.0x
Sequencing technology:: Illumina

IDs: 2023651 [UID] 7610948 [GenBank] 7618068 [RefSeq]

See Genome Information for Mycetocola reblochoni

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_003667525.1	=	GCF_003667525.1	ASM366752v1	Contig	Latest GenBank, Latest RefSeq

Comment

Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI
Annotation Date::10/15/2018 17:01:13
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline
Annotation Method::Best-placed reference protein set; GeneMarkS+
Annotation Software revision::4.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::2,813
CDS (total)::2,752
Genes (coding)::2,678
CDS (coding)::2,678
Genes (RNA)::61
rRNAs::3, 1, 1 (5S, 16S, 23S)
complete rRNAs::3, 1, 1 (5S, 16S, 23S)
tRNAs::53
ncRNAs::3
Pseudo Genes (total)::74
Pseudo Genes (ambiguous residues)::0 of 74
Pseudo Genes (frameshifted)::13 of 74
Pseudo Genes (incomplete)::59 of 74
Pseudo Genes (internal stop)::7 of 74
Pseudo Genes (multiple problems)::4 of 74
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	3,046,112
Total ungapped length	3,046,112
Number of contigs	29
Contig N50	300,101
Contig L50	4
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	29

Assembly

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ASM366752v1

See Genome Information for Mycetocola reblochoni

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

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