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ASM352288v1

Organism name:: Acinetobacter baumannii (g-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: 5845
BioSample:: SAMN07520231
BioProject:: PRJNA311558
Submitter:: Center for Genomic Sciences, National Autonomous University of Mexico (UNAM)
Date:: 2018/09/10
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
GenBank assembly accession:: GCA_003522885.1 (latest)
RefSeq assembly accession:: GCF_003522885.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
Assembly method:: SPAdes hybrid assembly v. 3.7.1
Expected final version:: yes
Genome coverage:: 161.914x
Sequencing technology:: Illumina MiSeq and PacBio RSII

IDs: 1950421 [UID] 7373288 [GenBank] 7423048 [RefSeq]

See Genome Information for Acinetobacter baumannii

Pathogen Detection Resources

There are 26545 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_003522885.1	=	GCF_003522885.1	ASM352288v1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
Bacteria available from Submitting center.

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Date::01/04/2024 20:40:54
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::3,835
CDSs (total)::3,739
Genes (coding)::3,673
CDSs (with protein)::3,673
Genes (RNA)::96
rRNAs::6, 6, 6 (5S, 16S, 23S)
complete rRNAs::6, 6, 6 (5S, 16S, 23S)
tRNAs::74
ncRNAs::4
Pseudo Genes (total)::66
CDSs (without protein)::66
Pseudo Genes (ambiguous residues)::0 of 66
Pseudo Genes (frameshifted)::21 of 66
Pseudo Genes (incomplete)::37 of 66
Pseudo Genes (internal stop)::14 of 66
Pseudo Genes (multiple problems)::6 of 66
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	3,989,947
Total ungapped length	3,989,947
Total number of chromosomes and plasmids	2

Molecule name	GenBank sequence		RefSeq sequence
Chromosome	CP023034.1	=	NZ_CP023034.1
Plasmid pAba5845a	CP023035.1	=	NZ_CP023035.1

Molecule	Total Length
All	3,989,947
Chromosome	3,980,012
Plasmid pAba5845a	9,935

	ANI	Query coverage	Subject coverage
Declared type	99.70	93.94	96.22
Best-match type	99.70	93.94	96.22

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ASM352288v1

See Genome Information for Acinetobacter baumannii

Pathogen Detection Resources

There are 26545 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

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