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ASM343351v1

Organism name:
Maritalea myrionectae (a-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: HL2708#5
BioSample:
SAMN06853988
BioProject:
PRJNA384915
Submitter:
Cotde-PKNU-Marine-Bio-Convergence
Date:
2018/04/10
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_003433515.1 (latest)
RefSeq assembly accession:
GCF_003433515.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Assembly method:
SMRT Analysis v. 2.3.0
Genome coverage:
303x
Sequencing technology:
PacBioRS2

IDs: 1908551 [UID] 7204588 [GenBank] 7265338 [RefSeq]

See Genome Information for Maritalea myrionectae

There are 2 assemblies for this organism

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History (Show revision history)

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
Bacteria and source DNA available from Cotde, Inc

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::05/05/2023 01:44:00
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.5
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::3,691
CDSs (total)::3,641
Genes (coding)::3,617
CDSs (with protein)::3,617
Genes (RNA)::50
rRNAs::2, 2, 2 (5S, 16S, 23S)
complete rRNAs::2, 2, 2 (5S, 16S, 23S)
tRNAs::40
ncRNAs::4
Pseudo Genes (total)::24
CDSs (without protein)::24
Pseudo Genes (ambiguous residues)::0 of 24
Pseudo Genes (frameshifted)::3 of 24
Pseudo Genes (incomplete)::21 of 24
Pseudo Genes (internal stop)::2 of 24
Pseudo Genes (multiple problems)::1 of 24
##Genome-Annotation-Data-END##

Global statistics

Total sequence length3,703,346
Total ungapped length3,703,346
Total number of chromosomes and plasmids3

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_003433525.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP021330.1=NZ_CP021330.1
Plasmid pHL2708X3CP021331.1=NZ_CP021331.1
Plasmid pHL2708Y3CP021332.1=NZ_CP021332.1

Assembly statistics

MoleculeTotal
Length
All3,703,346
Chromosome 3,380,026
Plasmid pHL2708X3174,698
Plasmid pHL2708Y3148,622

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Maritalea myrionectaeMaritalea myrionectae

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000423365.1Maritalea myrionectae DSM 19524type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000423365.1Maritalea myrionectaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type97.1887.3191.35
Best-match type97.1887.3191.35

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna