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ASM341772v2

Organism name:
Cannabis sativa (eudicots)
Infraspecific name:
Cultivar: Finola
BioSample:
SAMN09375800
BioProject:
PRJNA73819
Submitter:
University of Toronto
Date:
2018/11/26
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_003417725.2 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
QKVJ02
Assembly method:
FALCON v. 1.8.6
Expected final version:
no
Genome coverage:
97.635555363x
Sequencing technology:
PacBio

IDs: 2118521 [UID] 7934898 [GenBank]

See Genome Information for Cannabis sativa

There are 15 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length1,009,674,739
Total ungapped length1,009,380,639
Gaps between scaffolds2,941
Number of scaffolds5,303
Scaffold N50370,471
Scaffold L50784
Number of contigs5,303
Contig N50370,471
Contig L50784
Total number of chromosomes and plasmids10
Number of component sequences (WGS or clone)5,303

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_003417735.2)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM011605.1n/an/a0
Chromosome 2CM011606.1n/an/a0
Chromosome 3CM011607.1n/an/a0
Chromosome 4CM011608.1n/an/a0
Chromosome 5CM011609.1n/an/a0
Chromosome 6CM011610.1n/an/a0
Chromosome 7CM011611.1n/an/a0
Chromosome 8CM011612.1n/an/a0
Chromosome 9CM011613.1n/an/a0
Chromosome 10CM011614.1n/an/a0
unplacedn/an/an/a2,352

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All1,009,674,7395,3031,009,380,639370,47102,941
Chromosome 1100,649,945368100,613,245409,8200367
Chromosome 295,692,04335795,656,443396,6890356
Chromosome 394,587,70138294,549,601381,6290381
Chromosome 492,111,07834092,077,178450,5680339
Chromosome 587,047,43834487,013,138402,5250343
Chromosome 677,135,88728877,107,187427,8130287
Chromosome 776,634,83629076,605,936387,6470289
Chromosome 876,024,39728475,996,097438,0780283
Chromosome 949,536,29517049,519,395484,3970169
Chromosome 1035,338,26312835,325,563427,8440127
unplaced224,916,8562,352224,916,856194,37900