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ASM339955v1

Organism name:
Pungitius pungitius (ninespine stickleback)
Isolate:
CR61149
Sex:
male
BioSample:
SAMN05210078
BioProject:
PRJNA324574
Submitter:
University of Utah
Date:
2018/08/16
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_003399555.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
MKKR01
Assembly method:
AllPaths v. DECEMBER-2011; sspace v. JANUARY-2012
Expected final version:
yes
Genome coverage:
129.0x
Sequencing technology:
Illumina HiSeq; Sanger

IDs: 1905101 [UID] 7093338 [GenBank]

See Genome Information for Pungitius pungitius

There are 5 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length441,089,565
Total ungapped length377,142,006
Gaps between scaffolds0
Number of scaffolds7,847
Scaffold N50302,682
Scaffold L50323
Number of contigs49,352
Contig N5014,136
Contig L507,145
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)7,847

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced441,089,5657,847377,142,006302,68241,5050