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ASM312386v1

Organism name:
Juglans nigra (black walnut)
Infraspecific name:
Cultivar: Sparrow
BioSample:
SAMN08795865
BioProject:
PRJNA445704
Submitter:
University of California Davis
Date:
2018/05/14
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_003123865.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
QEOV01
Assembly method:
MaSuRCA v. 2.3.3; SOAPdenovo2 v. 2.04
Expected final version:
yes
Genome coverage:
300x
Sequencing technology:
Illumina

IDs: 1699431 [UID] 6491768 [GenBank]

See Genome Information for Juglans nigra

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length620,766,650
Total ungapped length588,802,181
Gaps between scaffolds0
Number of scaffolds90,472
Scaffold N50252,148
Scaffold L50710
Number of contigs140,480
Contig N5045,989
Contig L503,560
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)90,472

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced620,766,65090,472588,802,181252,14850,0080