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ASM312384v1

Organism name:
Juglans microcarpa (eudicots)
Isolate:
DJUG29.11
BioSample:
SAMN08795863
BioProject:
PRJNA445704
Submitter:
University of California Davis
Date:
2018/05/14
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_003123845.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
QEOX01
Assembly method:
MaSuRCA v. 2.3.3; SOAPdenovo2 v. 2.04
Expected final version:
yes
Genome coverage:
170x
Sequencing technology:
Illumina

IDs: 1699451 [UID] 6491738 [GenBank]

See Genome Information for Juglans microcarpa

History (Show revision history)

Global statistics

Total sequence length913,972,398
Total ungapped length865,433,423
Gaps between scaffolds0
Number of scaffolds112,570
Scaffold N50141,324
Scaffold L501,841
Number of contigs209,862
Contig N5032,209
Contig L507,235
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)112,570

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All913,972,398112,570865,433,423141,32497,2920
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