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ASM300315v1

Organism name:
Flavobacterium granuli (CFB group bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: DSM 17797
BioSample:
SAMN05443284
BioProject:
PRJNA331351
Submitter:
DOE Joint Genome Institute
Date:
2018/03/15
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_003003155.1 (latest)
RefSeq assembly accession:
GCF_003003155.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
PVUB01
Assembly method:
SPAdes v. 3.6.2
Expected final version:
no
Genome coverage:
325.0x
Sequencing technology:
Illumina HiSeq

IDs: 1632651 [UID] 6234138 [GenBank] 6249588 [RefSeq]

See Genome Information for Flavobacterium granuli

There are 3 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length3,799,284
Total ungapped length3,799,284
Number of contigs29
Contig N50360,662
Contig L504
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)29

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,799,284293,799,284360,66200

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Flavobacterium granuliFlavobacterium granuli

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900129705.1Flavobacterium granulitype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900129705.1Flavobacterium granulitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9999.8699.89
Best-match type99.9999.8699.89

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna