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ASM298943v1

Organism name:
Haemophilus influenzae (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: 126P12H2
BioSample:
SAMN06203498
BioProject:
PRJNA358390
Submitter:
Institute for Genome Sciences, University of Maryland, Baltimore
Date:
2018/03/09
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_002989435.1 (latest)
RefSeq assembly accession:
GCF_002989435.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
MZLL01
Assembly method:
Velvet v. 1.2.10
Genome coverage:
95.133388x
Sequencing technology:
Illumina HiSeq 2000

IDs: 1626301 [UID] 6198208 [GenBank] 6231898 [RefSeq]

See Genome Information for Haemophilus influenzae

There are 1324 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length1,917,412
Total ungapped length1,917,412
Number of contigs74
Contig N50107,622
Contig L508
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)74

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,917,412741,917,412107,62200

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Haemophilus influenzaeHaemophilus influenzae

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_001457655.1Haemophilus influenzaetype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001457655.1Haemophilus influenzaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type97.1187.9689.20
Best-match type97.1187.9689.20

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna