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ASM294091v2

  • Anomalous assembly.
Organism name:
Desmodus rotundus (common vampire bat)
Isolate:
DRU21DN04
Sex:
male
BioSample:
SAMN07783852
BioProject:
PRJNA414273
Submitter:
University of Copenhagen
Date:
2018/02/23
Assembly level:
Scaffold
Genome representation:
full
Assembly anomaly:
contaminated
Excluded from RefSeq:
  • contaminated
GenBank assembly accession:
GCA_002940915.2 (replaced)
RefSeq assembly accession:
GCF_002940915.1 (replaced)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT (in non-nuclear assembly-unit)
  • Data displayed for RefSeq version
WGS Project:
PEHR01
Assembly method:
SOAPdenovo v. 2.04; HiRise v. 2.0.5
Genome coverage:
94x
Sequencing technology:
Illumina Hiseq 2000/2500

IDs: 1654041 [UID] 6298718 [GenBank] 6309398 [RefSeq]

See Genome Information for Desmodus rotundus

There are 3 assemblies for this organism

See more

History (Show revision history)

Comment

In March 2018 4962 PEHR01 contigs and 378 scaffolds were suppressed because they were found to be contaminants.
In June 2022 745 sequences were suppressed because they were found to be contaminants.

Global statistics

Total sequence length2,063,808,397
Total ungapped length2,017,856,012
Gaps between scaffolds0
Number of scaffolds29,801
Scaffold N5026,869,735
Scaffold L5026
Number of contigs84,109
Contig N5080,250
Contig L506,951
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)84,109

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,063,791,73829,8002,017,839,35326,869,73554,3080
MoleculeTotal
Length
Mitochondrion MT16,659
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